GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| THCA | cis | rs4038131 | 1 | rs62132143 | chr2:17788743 | GEN1 | chr2:17935162-17966632:+ | 0.61 | 7.13 | 3.63E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132144 | chr2:17788790 | GEN1 | chr2:17935162-17966632:+ | 0.61 | 7.13 | 3.63E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132145 | chr2:17789253 | GEN1 | chr2:17935162-17966632:+ | 0.61 | 7.13 | 3.63E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132146 | chr2:17790133 | GEN1 | chr2:17935162-17966632:+ | 0.61 | 7.13 | 3.67E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132147 | chr2:17790876 | GEN1 | chr2:17935162-17966632:+ | 0.61 | 7.14 | 3.5E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132148 | chr2:17791048 | GEN1 | chr2:17935162-17966632:+ | 0.61 | 7.14 | 3.5E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132150 | chr2:17792359 | GEN1 | chr2:17935162-17966632:+ | 0.62 | 7.1 | 4.41E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132151 | chr2:17792698 | GEN1 | chr2:17935162-17966632:+ | 0.61 | 7.02 | 7.88E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62132152 | chr2:17794404 | GEN1 | chr2:17935162-17966632:+ | 0.6 | 6.99 | 9.04E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62133576 | chr2:17795297 | GEN1 | chr2:17935162-17966632:+ | 0.6 | 6.99 | 9.04E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62133577 | chr2:17798777 | GEN1 | chr2:17935162-17966632:+ | 0.6 | 7.03 | 7.16E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62133578 | chr2:17799575 | GEN1 | chr2:17935162-17966632:+ | 0.6 | 7.03 | 7.16E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62133579 | chr2:17800196 | GEN1 | chr2:17935162-17966632:+ | 0.6 | 7.03 | 7.16E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62133583 | chr2:17805779 | GEN1 | chr2:17935162-17966632:+ | 0.6 | 7.03 | 7.16E-12 | Psychosis and Alzheimer's disease |
| THCA | cis | rs4038131 | 1 | rs62133584 | chr2:17805944 | GEN1 | chr2:17935162-17966632:+ | 0.6 | 7.03 | 7.16E-12 | Psychosis and Alzheimer's disease |